CDS

Accession Number TCMCG075C05020
gbkey CDS
Protein Id XP_017971158.1
Location join(2242413..2242592,2243110..2243186,2243461..2243560,2243691..2243798,2244071..2244187,2244379..2244529,2245254..2245501,2245680..2245868,2246968..2247044,2247145..2247262,2247815..2247898,2248633..2248728,2248880..2248981,2249123..2249191,2249607..2249702,2249771..2249878,2250080..2250193,2250331..2250414,2251222..2251350,2251993..2252191,2252290..2252433,2252559..2252602,2252826..2252909,2252992..2253060,2253160..2253236,2253529..2253598,2253853..2254002,2254284..2254349,2254550..2254694,2254820..2254884,2254990..2255055,2255170..2255301)
Gene LOC18607395
GeneID 18607395
Organism Theobroma cacao

Protein

Length 1185aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018115669.1
Definition PREDICTED: Niemann-Pick C1 protein isoform X2 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCAGCTTCCAACCTCGCTATCGTTCCTAGACGCCATTGCAAAATTTACGCTACCTTTTGTCAAAGTTTTTCTTTAACTAACCAAAGCCCAACTCCACACCCACTTCACTTCTCTCGTTCTCGTCGACTAAAAATGAAGTTTCCTCCATGTTTTCTCGCTACTGTTTCTCTTTTACAGGTGATTTTATTCACGTCAGTACTGTGCGCAGAGAAGACTGATTCTGGTGGCCTTTCAGTTTCTTATCTTGCTGCAGGGGAAAGGCATTCAAAAGAGTATTGTGCAATGTATGATATATGTGGACAACGCAGTGATGGGAAAGTTCTGAATTGTCCTTATGGTACTCCATCTGTGAAGCCTGATGAGCTGTTTTCTGCCAAAATTCAAAGCTTGTGTCCATCAATAAGTGGTAATGTTTGTTGCACAGAGGATCAGTTTGACACATTGCGGGCACAGGTTCAACAGGCAATTCCTTTCCTTGTTGGTTGTCCAGCATGCTTGAGGAACTTCTTAAATCTTTTCTGTGGGCTTTCATGCTCTCCAAATCAAAGTCTCTTCATCAATGTGACTTCTGTTTCAGAGGTTAACGGAAACTTGACAGTGGATGGCATCGACTTTTACATATCTGATGCTTTTGGAGAAGGGCTGTATGACTCCTGTAAGGAGGTAAAGTTTGGGACCATGAATACACGGGCCATTGAATTCATAGGTGCTGGGGCAACAAACTTTAAAGAGTGGTTTGAGTTTATTGGTCAGAAAGCTCCTCCTGGATTTCCTGGTTCACCTTATGCTATTGATTTCAAGTCCAGTGTTCCTGACTTATCGGGAATGGAGCTTATGAACGTTTCTGCTTATTCATGTGGGGACACCTCGCTGGGATGCTCTTGTGGTGATTGCCCTTCATCACCTCAATGCTCCAATTCTGAACCTCCTTCACCACCGAAAAATGATCAATGCTCAATAGATATTGGGCCTGTTAAGGTAAAATGTATTGAATTTGCATTAGCTATAGCATATATTGTATTGGTTTTTGGACTTCTTGGATGGGCATTGTTTCATCGGCCAAGAGAAAGAAGAGATGTATCTGACAGGGAACCATTGCTGAAGTCCATGGATGAAGGTGAAGTGAATTCTGCTGAGATGCAGCATGATGATAACCTTGCTTTGAAGGGACATGAGGTGGCTCTGCAATTGACAAATGGGGCCCAACTTTCCGTTATTCAAGGATATATGTCGAGGTTTTACCGGAGTTATGGAGCATGGGTTACTAGAAATCCTACTCTTGTGCTGTGTTCATCATTGGCAGTTGTTATTGTGCTTTGTTTTGGTCTCATTCGTTTTGAAGTGGAGACACGGCCAGAGAAGTTGTGGGTAGGCCATGGGAGTAAGGCAGCAGAAGAGAAACAGTTTTTTGACAGTCACCTTGCGCCCTTCTACAGAATTGAACAGCTTATATTAGCAACTTTACCTGATAAAACGCATGGGAAACTACCCAGTATAGTTACTGAGGATAACATCCAATTGCTCTTTGAAATTCAAGAGAAGGTTGATAGAATTCGTGCAAATTATTCTGGTTCAACAGTGTCTCTGACCGACATTTGCTTGAATCCTCTTGGCCAAGCTTGTGCTACTCAGAGTGTTCTACAGTATTTTAAGATGGACCGGGAAAACTATGACTACTATGGAGGAGTTACACATGCTGAGTATTGTTTTCAGCATTACACTTCTTCAGACTCGTGTTTGAGCGCATTTGAGGCTCCACTTGATCCTAGCACTGCATTGGGAGGATTTTCTGGGAACAATTATTCCGAGGCTTCTGCATTCGTTGTGACCTACCCAGTTAATAATGCAATTGATGAAGCAGGCAATGGGAATGGGAAGGCTGTGGCTTGGGAAAAAGCTTTTATTCAGTTAGTAAAGGAGGAATTGCTACCAATGGTTCAGTCCAGAAATCTTACTCTTTCATTTTCATCTGAAAGCTCAATTGAGGAAGAACTGAAAAGAGAGAGCACTGCAGATATTGTAACAATTGTCGTAAGCTATCTTGTAATGTTTGTGTACATATCTGTTACATTGGGAGATGCACCTCATCTATCTACATTCTATATATCATCCAAGGTTTTGCTTGGTCTTTCAGGAGTTATTCTTGTCATGCTTTCTGTTCTTGGATCTGTTGGGGTTTTCAGCGCTTTTGGAGTTAAATCTACATTGATCATAATGGAAGTGATCCCTTTTCTGGTTTTGGCTGTTGGAGTGGATAACATGTGTATACTGGTTCATGCTGTAAAACGGCAACCATTGGAGTTACCTTTAGAGGAACGAATCAGTAATGCACTGGTTGAAGTTGGTCCATCCATAACGCTAGCTAGTTTGTCTGAGATTCTTGCATTTGCAGTTGGAGGTTTCATTCCTATGCCAGCATGCCGTGTCTTTTCCCTGTTTGCAGCATTGGCTGTTCTGCTGGACTTCCTTCTACAAGTTACAGCTTTTGTTTCACTGATAGTTTTCGACTGTCTGAGAGCTGAGGATAACAGGGTTGACTGTTTTCCGTGCATAAAAGTTCCTTCATCTGCTGCAGAGGCTGGTGAAGGCATGAACTCAAGACGGCCTGGACTTTTGGCTAGATATATGCGAGAAATACATGCACCCCTTCTTGGACTTTGGGGAGTCAAAGTGGTTGTAATTGCTGTCTTTGTTGCTTTTGCTTTGGCAAGCATTGCCCTTTCCACAAGGATTGAGTCTGGTTTGGAGCAACAAATTGTTCTTCCTCGGGACTCATATCTTCAGGGATACTTTACCGATATCTCAGAATTTCTCAGAATTGGACCACCATTATATTTTGTTGTTAAGGATTACAACTACAGCTTGGAATCAAGACATACAAACAAGTTATGCTCCATCAACCAGTGTGATTCTAACTCTCTTTTGAATGAGATATCAAGGGCATCATTAGTTCCAGAATCAAGCTACATTGCTAAGCCAGCTGCCTCATGGCTTGATGATTTTCTGGTATGGTTATCACCTGAGGCATTTGGTTGCTGTCGGAAGTTTACAAATGGCACTTACTGTCCACCAGATGATCAACCACCTTGCTGTTCACCTGATGGAGGTTCTTGTGGCTTAGGTGGAGTCTGCAAAGACTGTACAACGTGCTTCCGCCACTCAGATTTGATCAATGATCGCCCATCTACAGAGCAATTCAGAGAGAAGCTTCCTTGGTTCCTTAATGCTCTGCCATCTGCTGATTGTGCCAAAGGTGGTCATGGGGCTTACACCAGCAGTGTGGATTTGAATGGTTATGAGAGCGGTGTCATACAAGCATCAGAGTTTCGTACCTATCACACACCACTTAACAGACAAGGTGACTATGTTAATGCATTGCGAGCTGCACGGGAGTTCAGCTCAAGAATATCTGATTCATTGAAGGGCACAAGCATGAAAATGATGGTGGCTCAAACACTTTCTTTTTTGTGTTTTGACTCATCACTCTCTCTGTTGCTTTTGCTGGACTGCTGGATATGGTGCAGTATATTTATGGTCTCTATTATGCAGCTATGA
Protein:  
MAASNLAIVPRRHCKIYATFCQSFSLTNQSPTPHPLHFSRSRRLKMKFPPCFLATVSLLQVILFTSVLCAEKTDSGGLSVSYLAAGERHSKEYCAMYDICGQRSDGKVLNCPYGTPSVKPDELFSAKIQSLCPSISGNVCCTEDQFDTLRAQVQQAIPFLVGCPACLRNFLNLFCGLSCSPNQSLFINVTSVSEVNGNLTVDGIDFYISDAFGEGLYDSCKEVKFGTMNTRAIEFIGAGATNFKEWFEFIGQKAPPGFPGSPYAIDFKSSVPDLSGMELMNVSAYSCGDTSLGCSCGDCPSSPQCSNSEPPSPPKNDQCSIDIGPVKVKCIEFALAIAYIVLVFGLLGWALFHRPRERRDVSDREPLLKSMDEGEVNSAEMQHDDNLALKGHEVALQLTNGAQLSVIQGYMSRFYRSYGAWVTRNPTLVLCSSLAVVIVLCFGLIRFEVETRPEKLWVGHGSKAAEEKQFFDSHLAPFYRIEQLILATLPDKTHGKLPSIVTEDNIQLLFEIQEKVDRIRANYSGSTVSLTDICLNPLGQACATQSVLQYFKMDRENYDYYGGVTHAEYCFQHYTSSDSCLSAFEAPLDPSTALGGFSGNNYSEASAFVVTYPVNNAIDEAGNGNGKAVAWEKAFIQLVKEELLPMVQSRNLTLSFSSESSIEEELKRESTADIVTIVVSYLVMFVYISVTLGDAPHLSTFYISSKVLLGLSGVILVMLSVLGSVGVFSAFGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQPLELPLEERISNALVEVGPSITLASLSEILAFAVGGFIPMPACRVFSLFAALAVLLDFLLQVTAFVSLIVFDCLRAEDNRVDCFPCIKVPSSAAEAGEGMNSRRPGLLARYMREIHAPLLGLWGVKVVVIAVFVAFALASIALSTRIESGLEQQIVLPRDSYLQGYFTDISEFLRIGPPLYFVVKDYNYSLESRHTNKLCSINQCDSNSLLNEISRASLVPESSYIAKPAASWLDDFLVWLSPEAFGCCRKFTNGTYCPPDDQPPCCSPDGGSCGLGGVCKDCTTCFRHSDLINDRPSTEQFREKLPWFLNALPSADCAKGGHGAYTSSVDLNGYESGVIQASEFRTYHTPLNRQGDYVNALRAAREFSSRISDSLKGTSMKMMVAQTLSFLCFDSSLSLLLLLDCWIWCSIFMVSIMQL